Institute of Immunology & Infection Research

Flow Cytometry Core Facility

Aria stream

LSR II(BD) Bench-top Analyser
- Four laser
                   355nm UV
                    405nm violet
                    488nm Sapphire
                    633 HeNe

- 19 parameter
- cytometer for 17 (2, 6, 6, 3) colour analysis


Performance  (Top)
Fluorescence Sensitivity FITC-A : 80 molecules of equivalent soluable fluorophore
PE-A : 30 molecules of equivalent soluable fluorophore
Fluorescence Resolution Coefficient of variation in PI-Area of < 3%, full G0/G1 peak for propidium iodide–stained chicken erythrocyte nuclei
 
Forward and Side
Scatter Sensitivity
Sensitivity enables the separation of fixed platelets from noise, identification of bacteria and 0.5 micron beads
Forward and Side
Scatter Resolution
Scatter performance is optimized for resolving lymphocytes, monocytes, and granulocytes
 Acquistion rate  >20,000 events/second(2x107 cells/ml @ 60ul/min)

Excitation Optics  (Top)
Optical Platform Fixed optical assembly on cuvette flow cell
Lasers 20mW 355nm, Lightwave solid state
20mW 488nm, Sapphire argon-ion
20mW 635nm, Uniphase HeNe

Emission Optics  (Top)
Optical Coupling Quartz cuvette is coupled to emission lens by refractive index matching optical gel for optimum collection efficiency

Laser steering delivers spacially separated beams to flow cell

Fixed fiber apertures (125um separation)
Fluorescence detectors High performance, high dynamic range photomultipliers and red-sensitive photomultipliers with filters
405nm
Fluorescence Detectors and Filters 
450/50nm     PB/BV 421/Alexa 405/V450
525/5nm       BV 470/Qd 525/V500 /KO
560/20nm     PO/Qd 565
585/15nm      BV 570/Qd 585
605/12nm      BV 605/Qd 605
655/8nm       BV 650/Qd 655
488nm
Fluorescence Detectors and Filters 
525/30nm      FITC/Alexa-488/GFP/CFSE
575/26nm      PE/DsRED
610/20nm       PE-TR/ PI
670/14nm       PerCP/PE-Cy5/7AAD
695/40nm       PerCP-Cy5.5
780/60nm       PE-Cy7
635nm
Fluorescence Detectors and Filters
660/20nm       APC/Alexa-647
730/45nm       Alexa-700
780/60nm       APC-Cy7/APC-Alexa-750
355nm
Fluorescence Detectors and Filters 
450/40nm      Indo-1(bound)/Alexa-405 
530/30nm      DAPI/Hoechst/Indo-1(free)

Fluidics  (Top)
General Operation Front key panel control provides three modes: RUN, STNDBY, and PRIME; automatic standby mode conserves sheath fluid by stopping sheath flow when no sample tube is installed
Fluid Reservoirs Easily accessible 20L capacity sheath and waste containers ; level detectors automatically indicate low levels of sheath or high levels of waste
Sample Flow Rates Variable flow rates of 120-30 µL/min(HI), 70-17.5 µL/min(MED), and 24-6 µL/min(LOW).
Regulated pressure difference between sheath and sample
Quartz Cuvette Internal cross-section is rectangular 430 x 180-µm; external surfaces are anti-reflection coated for maximum transmission of laser light
Sample Concentration Single-cell suspension of 105 to 2 x 107 particles/mL recommended range

Signal Processing  (Top)
Workstation Resolution 262,144 linear channels displayed in a 5 log decade display
Data Acquisition Channels 13 parameters- 11 colour and 2 scatter
Fluorescence Compensation Networks Inter- and intra-beam software programmable resolution of 0.01%
Pulse Processing Width and Area measurements for discriminating doublets; available for all fluorescence parameters; Ratio measurements for intra-laser parameters
Time Time available correlated to any parameter for kinetic experiments or other applications.

Data Management System   (Top)
Workstation PC 
Central Processing Unit (CPU) Power PC Reduced Instruction Set Computer (RISC) CPU
Memory 2GB RAM
Level 2 Cache
Data Storage
Networking
CD ROM DVD/CD-ROM read/write combo drive
Monitor 2x19-inch MultiSync Monitors
Data File Structure Flow Cytometry Standard (FCS) 2.0 and 3.0 ASCII results file for data export